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  5. LOC_Os05g24930

LOC_Os05g24930


Description : PPR repeat containing protein, expressed


Gene families : OG_42_0009566 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g24930
Cluster HCCA clusters: cluster_0094


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 315 361
IPR002885 Pentatricopeptide_repeat 683 731
IPR002885 Pentatricopeptide_repeat 613 662
IPR002885 Pentatricopeptide_repeat 477 522
IPR002885 Pentatricopeptide_repeat 442 471
IPR002885 Pentatricopeptide_repeat 249 275
IPR002885 Pentatricopeptide_repeat 282 311
IPR002885 Pentatricopeptide_repeat 213 241
IPR002885 Pentatricopeptide_repeat 169 201
IPR002885 Pentatricopeptide_repeat 575 605
No external refs found!