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  5. Solyc08g006460

Solyc08g006460


Description : RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2)


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g006460
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
A4A49_23702 No alias putative e3 ubiquitin-protein ligase hip1 0.05 Orthogroups_2024-Update
At1g17970 No alias At1g17970/F2H15_16 [Source:UniProtKB/TrEMBL;Acc:Q944L9] 0.04 Orthogroups_2024-Update
Bradi2g16490 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g34660 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C00432.1 No alias regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... 0.03 Orthogroups_2024-Update
Brara.E02634.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.F03830.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.G02303.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G020814 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G061663 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G165044 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.02G103300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G158500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G018800.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Kfl00011_0080 kfl00011_0080_v1.1 no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
LOC_Os01g06590 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s254_59V6 No alias zinc finger (c3hc4-type ring finger) family protein 0.03 Orthogroups_2024-Update
Sobic.006G205100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.009G221600.3 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sopen01g050120 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen08g002410 No alias Ring finger domain 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 483 525
No external refs found!