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  5. LOC_Os05g28350

LOC_Os05g28350


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g28350
Cluster HCCA clusters: cluster_0026

Target Alias Description ECC score Gene Family Method Actions
73155 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
At4g16750 No alias Ethylene-responsive transcription factor ERF039... 0.02 Orthogroups_2024-Update
Bradi3g58980 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00653.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D01564.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.F03559.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G138396 No alias redox responsive transcription factor 1 0.02 Orthogroups_2024-Update
GRMZM2G173771 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
GRMZM2G438202 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.03G112000 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.05G049800 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.08G320700 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.15G152000 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Glyma.19G253100 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.20G070000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G172800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G077310.1 No alias subgroup ERF-VII transcription factor 0.02 Orthogroups_2024-Update
LOC_Os06g08340 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_924346g0010 No alias (at1g77200 : 104.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00004892-RA No alias (at1g19210 : 123.0) encodes a member of the DREB... 0.01 Orthogroups_2024-Update
PSME_00009547-RA No alias (at4g17500 : 103.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00052064-RA No alias (at5g21960 : 132.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G110700 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Pp1s121_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s138_190V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Pp1s487_24V6 No alias ap2 erf domain-containing transcription factor 0.01 Orthogroups_2024-Update
Seita.1G187800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G051200.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Seita.6G181700.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G151600.2 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Solyc04g051360 No alias Ethylene Response Factor D.1 0.02 Orthogroups_2024-Update
Sopen06g024300 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 49 97
No external refs found!