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LOC_Os05g28730


Description : zinc finger, C3HC4 type domain containing protein, expressed


Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g28730
Cluster HCCA clusters: cluster_0053

Target Alias Description ECC score Gene Family Method Actions
420592 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g46835 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Orthogroups_2024-Update
Brara.F01964.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.18G292200 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G207400.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G105300.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc01g079530 No alias RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 36 83
IPR022143 DUF3675 90 195
No external refs found!