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  5. LOC_Os05g29860

LOC_Os05g29860


Description : mitochondrial carrier protein, putative, expressed


Gene families : OG_42_0002487 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g29860
Cluster HCCA clusters: cluster_0086

Target Alias Description ECC score Gene Family Method Actions
Brara.H01799.1 No alias solute transporter *(MTCC) 0.04 Orthogroups_2024-Update
Potri.005G085900 No alias S-adenosylmethionine carrier 1 0.04 Orthogroups_2024-Update
Potri.005G197200 No alias S-adenosylmethionine carrier 1 0.04 Orthogroups_2024-Update
Solyc04g051580 No alias (DB244) meloidogyne-induced giant cell protein 0.03 Orthogroups_2024-Update
evm.model.contig_3693.9 No alias (at1g34065 : 181.0) S-adenosylmethionine carrier 2... 0.01 Orthogroups_2024-Update
evm.model.tig00000157.5 No alias (at1g34065 : 152.0) S-adenosylmethionine carrier 2... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 20 90
IPR018108 Mitochondrial_sb/sol_carrier 96 176
IPR018108 Mitochondrial_sb/sol_carrier 191 276
No external refs found!