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  5. Solyc08g006850

Solyc08g006850


Description : Patatin (AHRD V3.3 *** K4CIH3_SOLLC)


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g006850
Cluster HCCA clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
Potri.014G033600 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Potri.017G133800 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
Pp1s1_128V6 No alias patatin t5 0.02 Orthogroups_2024-Update
Sopen02g015250 No alias Patatin-like phospholipase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 35 214
No external refs found!