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  5. LOC_Os05g30310

LOC_Os05g30310


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g30310
Cluster HCCA clusters: cluster_0118

Target Alias Description ECC score Gene Family Method Actions
Bradi3g38179 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Bradi4g21862 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Glyma.05G072100 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.06G229800 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
LOC_Os05g03800 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Pp1s222_125V6 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 327 420
IPR007527 Znf_SWIM 610 637
IPR004330 FAR1_DNA_bnd_dom 112 205
No external refs found!