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LOC_Os05g30570


Description : heavy metal-associated domain containing protein, expressed


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g30570
Cluster HCCA clusters: cluster_0130

Target Alias Description ECC score Gene Family Method Actions
A4A49_14066 No alias heavy metal-associated isoprenylated plant protein 26 0.03 Orthogroups_2024-Update
Brara.I03269.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM5G822137 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G157900 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G022900 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G011060.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G112560.2 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00035558-RA No alias (at4g39700 : 119.0) Heavy metal transport/detoxification... 0.02 Orthogroups_2024-Update
Potri.010G114300 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Pp1s66_115V6 No alias heavy metal-associated domain containing expressed 0.02 Orthogroups_2024-Update
Solyc01g105000 No alias Heavy metal transport/detoxification superfamily protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 13 71
No external refs found!