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  5. Solyc08g006910

Solyc08g006910


Description : Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT5G23430.3)


Gene families : OG_42_0000674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000674_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g006910
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Potri.001G049400 No alias LEUNIG_homolog 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 265 300
IPR001680 WD40_repeat 350 385
IPR001680 WD40_repeat 143 176
IPR001680 WD40_repeat 111 134
IPR001680 WD40_repeat 183 220
No external refs found!