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  5. LOC_Os05g30970

LOC_Os05g30970


Description : copine, putative, expressed


Gene families : OG_42_0002036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g30970
Cluster HCCA clusters: cluster_0047

Target Alias Description ECC score Gene Family Method Actions
At1g08860 No alias Protein BONZAI 3 [Source:UniProtKB/Swiss-Prot;Acc:Q5XQC7] 0.03 Orthogroups_2024-Update
evm.model.tig00001264.8 No alias (at5g07300 : 144.0) Encodes a copine-like protein, which... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 66 166
IPR000008 C2_dom 204 295
IPR010734 Copine 361 577
No external refs found!