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  5. LOC_Os05g30980

LOC_Os05g30980


Description : RNA recognition motif containing protein, putative, expressed


Gene families : OG_42_0001337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g30980
Cluster HCCA clusters: cluster_0034

Target Alias Description ECC score Gene Family Method Actions
132785 No alias RNA binding;abscisic acid binding 0.01 Orthogroups_2024-Update
GRMZM2G005459 No alias RNA-binding protein-defense related 1 0.02 Orthogroups_2024-Update
GRMZM2G177001 No alias RNA-binding protein-defense related 1 0.02 Orthogroups_2024-Update
Pp1s175_12V6 No alias rna binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 136 204
IPR000504 RRM_dom 48 112
IPR000504 RRM_dom 382 452
No external refs found!