LOC_Os05g31510

Description : transposon protein, putative, unclassified, expressed

Gene families : OG_42_0000284 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g31510
Cluster	HCCA clusters: cluster_0144

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os10g01790	No alias	transposon protein, putative, unclassified, expressed	0.03	Orthogroups_2024-Update
Sobic.003G119750.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc11g020790	No alias	No description available	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003896	DNA primase activity	IEP	Predicted GO
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	689	718
IPR018289	MULE_transposase_dom	441	538
IPR004332	Transposase_MuDR	249	310

External Links

No external refs found!