LOC_Os05g31550

Description : disease resistance protein RGA4, putative, expressed

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g31550
Cluster	HCCA clusters: cluster_0080

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G393282	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.12G124700	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
LOC_Os02g20480	No alias	resistance protein candidate, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g23250	No alias	Leucine Rich Repeat family protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os05g31570	No alias	disease resistance protein RGA4, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g20020	No alias	NBS-LRR resistance-like protein B8, putative, expressed	0.04	Orthogroups_2024-Update
Seita.4G250500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.008G101200.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.010G010100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
MF	GO:0016289	CoA hydrolase activity	IEP	Predicted GO
MF	GO:0016790	thiolester hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	168	388

External Links

No external refs found!