1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g31920

LOC_Os05g31920


Description : FYVE zinc finger domain containing protein, expressed


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g31920
Cluster HCCA clusters: cluster_0064

Target Alias Description ECC score Gene Family Method Actions
At5g12350 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
At5g19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
Bradi2g26807 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Bradi2g61670 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
GRMZM2G174949 No alias Regulator of chromosome condensation (RCC1) family protein 0.02 Orthogroups_2024-Update
Glyma.11G168801 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Kfl00164_0110 kfl00164_0110_v1.... (at5g19420 : 817.0) Regulator of chromosome condensation... 0.03 Orthogroups_2024-Update
MA_54149g0010 No alias (at5g42140 : 796.0) Regulator of chromosome condensation... 0.03 Orthogroups_2024-Update
PSME_00001886-RA No alias (at5g19420 : 94.4) Regulator of chromosome condensation... 0.02 Orthogroups_2024-Update
Potri.003G197600 No alias Regulator of chromosome condensation (RCC1) family with... 0.04 Orthogroups_2024-Update
Potri.005G190000 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 Orthogroups_2024-Update
Sobic.003G438900.1 No alias regulatory protein *(RLD) of gravity sensing 0.04 Orthogroups_2024-Update
Solyc11g065120 No alias Regulator of chromosome condensation (RCC1) family... 0.03 Orthogroups_2024-Update
Sopen03g035290 No alias Regulator of chromosome condensation (RCC1) repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027988 BRX_N 906 933
IPR000408 Reg_chr_condens 605 652
IPR000408 Reg_chr_condens 329 377
IPR000408 Reg_chr_condens 499 548
IPR000408 Reg_chr_condens 380 431
IPR000408 Reg_chr_condens 436 484
IPR000408 Reg_chr_condens 551 600
IPR000306 Znf_FYVE 656 722
IPR013591 Brevis_radix_dom 1013 1068
No external refs found!