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  5. Solyc08g007200

Solyc08g007200


Description : Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA)


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g007200
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G158400 No alias vamp/synaptobrevin-associated protein 27-2 0.03 Orthogroups_2024-Update
Kfl00193_0170 kfl00193_0170_v1.... (at3g60600 : 183.0) Encodes VAP27 (for... 0.01 Orthogroups_2024-Update
LOC_Os10g40170 No alias expressed protein 0.03 Orthogroups_2024-Update
Potri.001G152000 No alias vesicle associated protein 0.03 Orthogroups_2024-Update
Potri.014G059500 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.03 Orthogroups_2024-Update
Pp1s10_176V6 No alias vesicle-associated membrane 0.02 Orthogroups_2024-Update
Sopen01g036720 No alias MSP (Major sperm protein) domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0030904 retromer complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 10 99
No external refs found!