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  5. Solyc08g007250

Solyc08g007250


Description : Disease resistance protein (AHRD V3.3 *** W9RZV6_9ROSA)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g007250
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
At1g15890 No alias Probable disease resistance protein At1g15890... 0.04 Orthogroups_2024-Update
Brara.K00645.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os09g10054 No alias disease resistance protein RPS2, putative, expressed 0.03 Orthogroups_2024-Update
MA_31961g0010 No alias (at5g63020 : 182.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_728287g0010 No alias (at1g61300 : 175.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00026738-RA No alias (at1g61180 : 216.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
PSME_00028592-RA No alias (at1g12220 : 233.0) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
Potri.001G313301 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.001G404800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T027200 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T044500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T045200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 169 446
IPR001611 Leu-rich_rpt 528 584
No external refs found!