LOC_Os05g35170

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g35170
Cluster	HCCA clusters: cluster_0100

Target	Alias	Description	ECC score	Gene Family Method
A4A49_11542	No alias	nac domain-containing protein 37	0.03	Orthogroups_2024-Update
A4A49_29314	No alias	nac domain-containing protein 43	0.03	Orthogroups_2024-Update
At1g33060	No alias	NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]	0.03	Orthogroups_2024-Update
At1g33280	No alias	NAC015 [Source:UniProtKB/TrEMBL;Acc:A0A178W4M7]	0.02	Orthogroups_2024-Update
At1g79580	No alias	Protein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17]	0.03	Orthogroups_2024-Update
At5g61430	No alias	NAC domain-containing protein 100...	0.04	Orthogroups_2024-Update
Brara.B01408.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.K01325.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G082709	No alias	NAC domain containing protein 71	0.02	Orthogroups_2024-Update
GRMZM2G092465	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.04G226700	No alias	NAC transcription factor-like 9	0.03	Orthogroups_2024-Update
Glyma.08G041500	No alias	NAC domain containing protein 58	0.02	Orthogroups_2024-Update
HORVU2Hr1G045580.8	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
PSME_00030678-RA	No alias	(at1g65910 : 262.0) NAC domain containing protein 28...	0.04	Orthogroups_2024-Update
Potri.003G113000	No alias	NAC 007	0.04	Orthogroups_2024-Update
Potri.013G092400	No alias	NAC domain containing protein 70	0.03	Orthogroups_2024-Update
Pp1s42_248V6	No alias	nac domain-containing	0.01	Orthogroups_2024-Update
Pp1s44_300V6	No alias	nac domain ipr003441	0.02	Orthogroups_2024-Update
Sobic.001G386000.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Solyc06g074170	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC)	0.04	Orthogroups_2024-Update
Sopen11g003870	No alias	No apical meristem (NAM) protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004451	isocitrate lyase activity	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predicted GO
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predicted GO
BP	GO:0022406	membrane docking	IEP	Predicted GO
MF	GO:0030570	pectate lyase activity	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0048278	vesicle docking	IEP	Predicted GO
BP	GO:0051640	organelle localization	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	132

External Links

No external refs found!

LOC_Os05g35170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation