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  5. LOC_Os05g35310

LOC_Os05g35310


Description : ankyrin repeat family protein, putative, expressed


Gene families : OG_42_0000140 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g35310
Cluster HCCA clusters: cluster_0130

Target Alias Description ECC score Gene Family Method Actions
Brara.C03061.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.06G294100 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
LOC_Os11g24840 No alias ankyrin repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
Seita.8G076600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G179000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G146250.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 425 525
IPR020683 Ankyrin_rpt-contain_dom 9 97
IPR020683 Ankyrin_rpt-contain_dom 105 175
No external refs found!