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  5. Solyc01g087130

Solyc01g087130


Description : R2R3MYB transcription factor 47


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g087130
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
At1g66230 No alias Transcription factor MYB20... 0.02 Orthogroups_2024-Update
At5g06100 No alias Transcription factor MYB33... 0.03 Orthogroups_2024-Update
Bradi2g17982 No alias myb domain protein 86 0.04 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.04 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.05 Orthogroups_2024-Update
Bradi3g37047 No alias myb domain protein 30 0.02 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.02 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Brara.I05267.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G011422 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
GRMZM2G051528 No alias myb domain protein 12 0.04 Orthogroups_2024-Update
GRMZM2G147346 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.03G163100 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.04G205100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Glyma.05G051700 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Glyma.06G003800 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.06G178600 No alias myb domain protein 86 0.03 Orthogroups_2024-Update
Glyma.07G038000 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Glyma.09G238800 No alias myb domain protein 30 0.04 Orthogroups_2024-Update
Glyma.11G107100 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.16G189400 No alias myb domain protein 18 0.03 Orthogroups_2024-Update
Glyma.20G158100 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.04 Orthogroups_2024-Update
LOC_Os01g18240 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g36890 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g33150 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33660 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10157944g0010 No alias (p20026|myb1_horvu : 261.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_10429682g0010 No alias (p20026|myb1_horvu : 172.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00010774-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
PSME_00035013-RA No alias (at4g38620 : 257.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00040054-RA No alias (at3g13890 : 229.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00050636-RA No alias (p20025|myb38_maize : 262.0) Myb-related protein Zm38 -... 0.02 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052193-RA No alias (at5g65790 : 223.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
PSME_00052883-RA No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.03 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.03 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.003G144200 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Potri.003G155700 No alias myb domain protein 67 0.03 Orthogroups_2024-Update
Potri.005G096600 No alias myb domain protein 63 0.04 Orthogroups_2024-Update
Potri.009G061500 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Potri.012G055600 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Potri.015G082700 No alias myb domain protein 50 0.04 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.04 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.05 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Seita.1G309600.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G142100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G274200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.03 Orthogroups_2024-Update
Seita.6G063000.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.6G154200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G307500.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G368500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G390800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sopen03g013390 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen06g023610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 27 74
IPR001005 SANT/Myb 80 123
No external refs found!