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  5. Solyc08g007530

Solyc08g007530


Description : AT hook, DNA-binding motif-containing protein (AHRD V3.3 *** A0A103XG23_CYNCS)


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g007530
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
A4A49_13238 No alias at-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update
Brara.J00729.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Glyma.06G014600 No alias AT hook motif DNA-binding family protein 0.05 Orthogroups_2024-Update
Glyma.09G260600 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.10G065500 No alias AT-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update
Pp1s157_16V6 No alias dna binding 0.02 Orthogroups_2024-Update
Seita.1G373400.1 No alias AHL clade-B transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G024100.1 No alias AHL clade-B transcription factor 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 143 258
No external refs found!