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  5. LOC_Os05g38520

LOC_Os05g38520


Description : 60S ribosomal protein L36-2, putative, expressed


Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os05g38520
Cluster HCCA clusters: cluster_0084

Target Alias Description ECC score Gene Family Method Actions
267958 No alias Ribosomal protein L36e family protein 0.02 Orthogroups_2024-Update
439710 No alias Ribosomal protein L36e family protein 0.02 Orthogroups_2024-Update
At2g37600 No alias 60S ribosomal protein L36-1... 0.06 Orthogroups_2024-Update
Bradi2g23260 No alias Ribosomal protein L36e family protein 0.06 Orthogroups_2024-Update
Brara.C01889.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.D02287.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.E00749.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.G01608.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Cre12.g484050 No alias Ribosomal protein L36e family protein 0.08 Orthogroups_2024-Update
GRMZM2G009936 No alias Ribosomal protein L36e family protein 0.02 Orthogroups_2024-Update
Glyma.10G233900 No alias Ribosomal protein L36e family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G072270.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Kfl00110_0150 kfl00110_0150_v1.1 (at2g37600 : 143.0) Ribosomal protein L36e family... 0.02 Orthogroups_2024-Update
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00032528-RA No alias (at3g53740 : 137.0) Ribosomal protein L36e family... 0.06 Orthogroups_2024-Update
PSME_00032530-RA No alias (at3g53740 : 141.0) Ribosomal protein L36e family... 0.02 Orthogroups_2024-Update
Pp1s249_65V6 No alias 60s ribosomal protein l36-2 0.06 Orthogroups_2024-Update
Pp1s34_151V6 No alias 60s ribosomal protein l36-2 0.02 Orthogroups_2024-Update
Pp1s84_102V6 No alias 60s ribosomal protein l36-2 0.04 Orthogroups_2024-Update
Sobic.009G163800.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc03g025520 No alias 60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC) 0.08 Orthogroups_2024-Update
Sopen03g004360 No alias Ribosomal protein L36e 0.04 Orthogroups_2024-Update
Sopen06g011800 No alias Ribosomal protein L36e 0.03 Orthogroups_2024-Update
evm.model.tig00021493.69 No alias (at2g37600 : 127.0) Ribosomal protein L36e family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 8 101
No external refs found!