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  5. LOC_Os05g38670

LOC_Os05g38670


Description : cation efflux family protein, putative, expressed


Gene families : OG_42_0000596 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g38670
Cluster HCCA clusters: cluster_0132

Target Alias Description ECC score Gene Family Method Actions
A4A49_08671 No alias metal tolerance protein 4 0.03 Orthogroups_2024-Update
A4A49_13437 No alias metal tolerance protein 4 0.03 Orthogroups_2024-Update
Glyma.14G206600 No alias Cation efflux family protein 0.03 Orthogroups_2024-Update
Glyma.18G050400 No alias Cation efflux family protein 0.02 Orthogroups_2024-Update
Sobic.001G445000.1 No alias manganese cation transporter *(Mn-CDF) & manganese... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA InterProScan predictions
MF GO:0008324 cation transmembrane transporter activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002524 Cation_efflux 168 299
IPR027470 Cation_efflux_CTD 331 402
No external refs found!