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  5. LOC_Os05g38680

LOC_Os05g38680


Description : plant-specific domain TIGR01589 family protein, expressed


Gene families : OG_42_0001173 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g38680
Cluster HCCA clusters: cluster_0040

Target Alias Description ECC score Gene Family Method Actions
A4A49_15333 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_24509 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At5g02580 No alias Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0] 0.02 Orthogroups_2024-Update
Bradi2g54400 No alias Plant protein 1589 of unknown function 0.03 Orthogroups_2024-Update
Brara.C00079.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E00626.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.19G174600 No alias Plant protein 1589 of unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G058560.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g62060 No alias plant-specific domain TIGR01589 family protein, expressed 0.02 Orthogroups_2024-Update
MA_10994g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_138753g0010 No alias (at3g55240 : 95.1) Overexpression leads to PEL... 0.02 Orthogroups_2024-Update
Mp1g25980.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Seita.3G215000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G349100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g054750 No alias Plant protein 1589 of unknown function (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen04g005470 No alias Plant protein 1589 of unknown function (A_thal_3526) 0.03 Orthogroups_2024-Update
Sopen05g033220 No alias Plant protein 1589 of unknown function (A_thal_3526) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004334 fumarylacetoacetase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Predicted GO
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR006476 CHP01589_pln 14 65
No external refs found!