LOC_Os05g38730

Description : SAC3/GANP family protein, putative, expressed

Gene families : OG_42_0004561 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004561_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g38730
Cluster	HCCA clusters: cluster_0130

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g54290	No alias	SAC3/GANP/Nin1/mts3/eIF-3 p25 family	0.03	Orthogroups_2024-Update
Glyma.10G292300	No alias	SAC3/GANP/Nin1/mts3/eIF-3 p25 family	0.03	Orthogroups_2024-Update
MA_39508g0010	No alias	(at2g39340 : 426.0) SAC3/GANP/Nin1/mts3/eIF-3 p25...	0.02	Orthogroups_2024-Update
Mp8g06380.1	No alias	scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
CC	GO:0030118	clathrin coat	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030125	clathrin vesicle coat	IEP	Predicted GO
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Predicted GO
CC	GO:0030132	clathrin coat of coated pit	IEP	Predicted GO
CC	GO:0044431	Golgi apparatus part	IEP	Predicted GO
CC	GO:0044433	cytoplasmic vesicle part	IEP	Predicted GO
CC	GO:0044459	plasma membrane part	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO
BP	GO:0120009	intermembrane lipid transfer	IEP	Predicted GO
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005062	SAC3/GANP/THP3	581	795

External Links

No external refs found!