1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g38830

LOC_Os05g38830


Description : HECT-domain domain containing protein, expressed


Gene families : OG_42_0001466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g38830
Cluster HCCA clusters: cluster_0142

Target Alias Description ECC score Gene Family Method Actions
At4g38600 No alias E3 ubiquitin-protein ligase UPL3... 0.03 Orthogroups_2024-Update
GRMZM2G374574 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
Glyma.10G049100 No alias ubiquitin-protein ligase 4 0.03 Orthogroups_2024-Update
Glyma.12G032500 No alias HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.03 Orthogroups_2024-Update
PSME_00021195-RA No alias (at4g38600 : 1459.0) encodes a member of HECT ubiquitin... 0.02 Orthogroups_2024-Update
Potri.016G085200 No alias ubiquitin-protein ligase 4 0.02 Orthogroups_2024-Update
Sobic.006G032300.1 No alias E3 ubiquitin ligase *(UPL3) 0.03 Orthogroups_2024-Update
evm.model.tig00020554.36 No alias (at4g38600 : 291.0) encodes a member of HECT ubiquitin... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000569 HECT_dom 177 524
No external refs found!