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  5. LOC_Os05g39240

LOC_Os05g39240


Description : ammonium transporter protein, putative, expressed


Gene families : OG_42_0000450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g39240
Cluster HCCA clusters: cluster_0070

Target Alias Description ECC score Gene Family Method Actions
Bradi2g22670 No alias ammonium transporter 2 0.02 Orthogroups_2024-Update
Glyma.07G153800 No alias ammonium transporter 2 0.02 Orthogroups_2024-Update
Kfl00008_0180 kfl00008_0180_v1.1 (at2g38290 : 498.0) encodes a high-affinity ammonium... 0.01 Orthogroups_2024-Update
Kfl00056_0140 kfl00056_0140_v1.1 (at2g38290 : 510.0) encodes a high-affinity ammonium... 0.02 Orthogroups_2024-Update
PSME_00035364-RA No alias (at2g38290 : 600.0) encodes a high-affinity ammonium... 0.02 Orthogroups_2024-Update
PSME_00044365-RA No alias (at2g38290 : 591.0) encodes a high-affinity ammonium... 0.02 Orthogroups_2024-Update
PSME_00047933-RA No alias (at2g38290 : 345.0) encodes a high-affinity ammonium... 0.03 Orthogroups_2024-Update
PSME_00051490-RA No alias (at2g38290 : 627.0) encodes a high-affinity ammonium... 0.03 Orthogroups_2024-Update
Potri.018G033500 No alias ammonium transporter 2 0.03 Orthogroups_2024-Update
Seita.3G209900.1 No alias ammonium transporter *(AMT2/3) 0.02 Orthogroups_2024-Update
Seita.9G019500.1 No alias ammonium transporter *(AMT2/3) 0.02 Orthogroups_2024-Update
Sobic.003G344700.1 No alias ammonium transporter *(AMT2/3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA InterProScan predictions
BP GO:0015696 ammonium transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 24 441
No external refs found!