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  5. LOC_Os05g39500

LOC_Os05g39500


Description : DUF640 domain containing protein, putative, expressed


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g39500
Cluster HCCA clusters: cluster_0057

Target Alias Description ECC score Gene Family Method Actions
Bradi3g28800 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Brara.A00975.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Brara.B02853.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H00962.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G147241 No alias Protein of unknown function (DUF640) 0.01 Orthogroups_2024-Update
Seita.1G076300.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Seita.5G366900.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Solyc02g069510 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Solyc10g008000 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.02 Orthogroups_2024-Update
Sopen07g027140 No alias Protein of unknown function (DUF640) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 22 143
No external refs found!