1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g39540

LOC_Os05g39540


Description : metal cation transporter, putative, expressed


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g39540
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
A4A49_32895 No alias zinc transporter 5 0.03 Orthogroups_2024-Update
A4A49_62748 No alias putative zinc transporter 10 0.03 Orthogroups_2024-Update
Bradi1g12860 No alias zinc transporter 10 precursor 0.02 Orthogroups_2024-Update
Brara.E01135.1 No alias metal cation transporter *(ZIP) 0.04 Orthogroups_2024-Update
Potri.010G134300 No alias zinc transporter 7 precursor 0.03 Orthogroups_2024-Update
Potri.018G053300 No alias zinc transporter 4 precursor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046873 metal ion transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 41 358
No external refs found!