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  5. LOC_Os05g39560

LOC_Os05g39560


Description : metal cation transporter, putative, expressed


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g39560
Cluster HCCA clusters: cluster_0102

Target Alias Description ECC score Gene Family Method Actions
Brara.A01066.1 No alias iron/zinc/manganese/cobalt cation transporter *(IRT) &... 0.02 Orthogroups_2024-Update
Glyma.15G262800 No alias zinc transporter 1 precursor 0.02 Orthogroups_2024-Update
Glyma.17G228600 No alias iron regulated transporter 3 0.03 Orthogroups_2024-Update
HORVU2Hr1G025400.1 No alias metal cation transporter *(ZIP) 0.02 Orthogroups_2024-Update
Potri.010G134300 No alias zinc transporter 7 precursor 0.03 Orthogroups_2024-Update
Pp1s14_371V6 No alias zinc transporter 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046873 metal ion transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 46 350
No external refs found!