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  5. LOC_Os05g39650

LOC_Os05g39650


Description : phytanoyl-CoA dioxygenase, putative, expressed


Gene families : OG_42_0005023 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005023_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os05g39650
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
Potri.006G222800 No alias phytanoyl-CoA dioxygenase (PhyH) family protein 0.03 Orthogroups_2024-Update
Seita.9G122700.1 No alias phytanoyl-CoA hydroxylase *(PAHX) 0.03 Orthogroups_2024-Update
Solyc05g007970 No alias Phytanoyl-CoA dioxygenase domain protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008775 Phytyl_CoA_dOase 15 250
No external refs found!