LOC_Os05g39760

Description : VHS and GAT domain containing protein, expressed

Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g39760
Cluster	HCCA clusters: cluster_0120

Target	Alias	Description	ECC score	Gene Family Method
HORVU7Hr1G077230.1	No alias	ubiquitin adaptor protein *(TOL)	0.03	Orthogroups_2024-Update
Seita.1G121600.1	No alias	ubiquitin adaptor protein *(TOL)	0.03	Orthogroups_2024-Update
Seita.4G162300.1	No alias	ubiquitin adaptor protein *(TOL)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004152	GAT_dom	204	277
IPR002014	VHS_dom	16	126

External Links

No external refs found!