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  5. LOC_Os05g40330

LOC_Os05g40330


Description : auxin efflux carrier component, putative, expressed


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g40330
Cluster HCCA clusters: cluster_0065

Target Alias Description ECC score Gene Family Method Actions
At2g17500 No alias Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8] 0.03 Orthogroups_2024-Update
Bradi2g53360 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Brara.B02272.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Brara.E01632.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Brara.H00235.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.02 Orthogroups_2024-Update
Glyma.10G189000 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Glyma.16G114900 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Mp5g19620.1 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 Orthogroups_2024-Update
Solyc10g074790 No alias Auxin efflux carrier family protein (AHRD V3.3 *** AT5G01990.1) 0.03 Orthogroups_2024-Update
Sopen02g035860 No alias Membrane transport protein 0.02 Orthogroups_2024-Update
Sopen03g005840 No alias Membrane transport protein 0.02 Orthogroups_2024-Update
Sopen12g031650 No alias Membrane transport protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
BP GO:0006848 pyruvate transport IEP Predicted GO
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015718 monocarboxylic acid transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1901475 pyruvate transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 33 429
No external refs found!