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  5. LOC_Os05g40960

LOC_Os05g40960


Description : Myb transcription factor, putative, expressed


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g40960
Cluster HCCA clusters: cluster_0069

Target Alias Description ECC score Gene Family Method Actions
A4A49_12162 No alias protein phosphate starvation response 1 0.02 Orthogroups_2024-Update
A4A49_36129 No alias protein phosphate starvation response 1 0.03 Orthogroups_2024-Update
Bradi3g52500 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g18590 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Brara.A00862.1 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Glyma.15G123000 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os07g25710 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s109_107V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s112_141V6 No alias transfactor-like protein 0.02 Orthogroups_2024-Update
Pp1s114_151V6 No alias kan transcription factor 0.02 Orthogroups_2024-Update
Pp1s33_139V6 No alias myb family transcription factor 0.02 Orthogroups_2024-Update
Pp1s37_226V6 No alias F18A5.30; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G168800.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G121600.1 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Solyc06g008200 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 46 97
IPR025756 Myb_CC_LHEQLE 145 192
No external refs found!