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  5. LOC_Os05g41240

LOC_Os05g41240


Description : Myb-like DNA-binding domain containing protein, putative, expressed


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g41240
Cluster HCCA clusters: cluster_0100

Target Alias Description ECC score Gene Family Method Actions
A4A49_37335 No alias protein phr1-like 3 0.03 Orthogroups_2024-Update
At2g42660 No alias At2g45350/F14N22.7 [Source:UniProtKB/TrEMBL;Acc:Q9SJJ0] 0.03 Orthogroups_2024-Update
At4g13640 No alias Homeodomain-like superfamily protein [Source:TAIR;Acc:AT4G13640] 0.03 Orthogroups_2024-Update
Bradi1g14480 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g32370 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36260 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g52320 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g27620 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Brara.A02598.1 No alias transcription factor *(PHR1) & GARP subgroup PHL... 0.02 Orthogroups_2024-Update
Brara.B03010.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Brara.C03930.1 No alias transcription factor *(PHR1) & GARP subgroup PHL... 0.02 Orthogroups_2024-Update
Brara.F03438.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G039700 No alias phosphate starvation response 1 0.02 Orthogroups_2024-Update
Glyma.12G211600 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.14G211900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G108600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G017240.8 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
PSME_00031433-RA No alias (at4g28610 : 112.0) Similar to phosphate starvation... 0.03 Orthogroups_2024-Update
PSME_00043647-RA No alias (at3g24120 : 209.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
Potri.003G100100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G075100 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Pp1s111_87V6 No alias dna binding 0.02 Orthogroups_2024-Update
Sobic.006G181600.1 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.02 Orthogroups_2024-Update
Solyc11g067280 No alias MYB-CC type transfactor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 131 177
IPR001005 SANT/Myb 48 98
No external refs found!