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  5. LOC_Os05g41310

LOC_Os05g41310


Description : disease resistance protein RGA2, putative, expressed


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g41310
Cluster HCCA clusters: cluster_0108

Target Alias Description ECC score Gene Family Method Actions
Bradi2g36176 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Orthogroups_2024-Update
Bradi2g52840 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.06G318566 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G085600 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G139400 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G000860.7 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G000760.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os06g45690 No alias symbiosis-related disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g07400 No alias disease resistance RPP13-like protein 1, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os11g10770 No alias disease resistance protein RGA3, putative, expressed 0.03 Orthogroups_2024-Update
Potri.006G274300 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G121700 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G123500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.2G055400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G402500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G197600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G180900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G010100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G242900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen11g025560 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 174 418
No external refs found!