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  5. Solyc08g008030

Solyc08g008030


Description : AT hook motif DNA-binding family protein, putative (AHRD V3.3 *** A0A061G6C0_THECC)


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g008030
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
At4g17950 No alias AT-hook motif nuclear-localized protein 13... 0.03 Orthogroups_2024-Update
Potri.005G256500 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Sopen03g003140 No alias Domain of unknown function (DUF296) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005351 carbohydrate:proton symporter activity IEP Predicted GO
MF GO:0005402 carbohydrate:cation symporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0008643 carbohydrate transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0015294 solute:cation symporter activity IEP Predicted GO
MF GO:0015295 solute:proton symporter activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 166 281
No external refs found!