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  5. LOC_Os05g43760

LOC_Os05g43760


Description : TCP family transcription factor, putative, expressed


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g43760
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
At2g31070 No alias Transcription factor TCP10... 0.03 Orthogroups_2024-Update
Glyma.12G208800 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
LOC_Os02g51310 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G375800 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
Potri.012G059900 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Potri.015G050500 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G299700.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G172200.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Solyc03g119770 No alias branched1a 0.03 Orthogroups_2024-Update
Sopen02g033790 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 55 117
No external refs found!