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  5. LOC_Os05g44600

LOC_Os05g44600


Description : pectinesterase, putative, expressed


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os05g44600
Cluster HCCA clusters: cluster_0124

Target Alias Description ECC score Gene Family Method Actions
76951 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
At1g05310 No alias Probable pectinesterase 8... 0.02 Orthogroups_2024-Update
Bradi3g17880 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.B00839.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.13G113700 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Mp2g19430.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00045931-RA No alias (at5g47500 : 448.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s35_88V6 No alias pectin methylesterase 0.01 Orthogroups_2024-Update
Pp1s3_508V6 No alias pectinesterase ppe8b 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc09g091730 No alias Pectinesterase (AHRD V3.3 *** K4CWJ9_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 107 392
No external refs found!