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  5. LOC_Os05g45230

LOC_Os05g45230


Description : WRKY58, expressed


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g45230
Cluster HCCA clusters: cluster_0145

Target Alias Description ECC score Gene Family Method Actions
At2g04880 No alias WRKY transcription factor 1... 0.04 Orthogroups_2024-Update
Glyma.02G115200 No alias WRKY DNA-binding protein 57 0.02 Orthogroups_2024-Update
Glyma.14G006800 No alias zinc-dependent activator protein-1 0.02 Orthogroups_2024-Update
PSME_00035158-RA No alias (at3g01970 : 114.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00049501-RA No alias (at1g62300 : 149.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
PSME_00052260-RA No alias (at5g26170 : 117.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
Potri.007G079800 No alias WRKY DNA-binding protein 51 0.02 Orthogroups_2024-Update
Potri.014G118200 No alias WRKY DNA-binding protein 23 0.02 Orthogroups_2024-Update
Seita.1G334400.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G008600.2 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g007380 No alias WRKY transcription factor 52 0.02 Orthogroups_2024-Update
Solyc08g081630 No alias WRKY transcription factor 56 0.02 Orthogroups_2024-Update
Solyc09g014990 No alias WRKY transcription factor 33 0.03 Orthogroups_2024-Update
Sopen01g038890 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update
Sopen08g021300 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 129 148
No external refs found!