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  5. LOC_Os05g46550

LOC_Os05g46550


Description : adaptor complexes medium subunit family domain containing protein, expressed


Gene families : OG_42_0002880 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g46550
Cluster HCCA clusters: cluster_0097

Target Alias Description ECC score Gene Family Method Actions
A4A49_27876 No alias ap-1 complex subunit mu-2 0.04 Orthogroups_2024-Update
Brara.F00719.1 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.03 Orthogroups_2024-Update
HORVU1Hr1G079050.3 No alias medium subunit mu of AP-1 trans-Golgi network cargo... 0.02 Orthogroups_2024-Update
Solyc04g026380 No alias AP-1 complex subunit mu (AHRD V3.3 *** G5DWW9_SILLA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR028565 MHD 161 428
IPR022775 AP_mu_sigma_su 7 128
No external refs found!