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  5. Solyc08g008410

Solyc08g008410


Description : Plant regulator RWP-RK family protein (AHRD V3.3 *** G7IAL8_MEDTR)


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g008410
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Brara.A00305.1 No alias transcription factor *(NIN) & NLP-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F01471.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.03 Orthogroups_2024-Update
Brara.G03430.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.02 Orthogroups_2024-Update
Brara.H02321.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.04 Orthogroups_2024-Update
Brara.I01314.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update
GRMZM2G031398 No alias Plant regulator RWP-RK family protein 0.04 Orthogroups_2024-Update
GRMZM2G375675 No alias NIN like protein 7 0.05 Orthogroups_2024-Update
HORVU4Hr1G082110.3 No alias NLP-type transcription factor & transcription factor *(NIN) 0.02 Orthogroups_2024-Update
Seita.8G074000.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.02 Orthogroups_2024-Update
Sobic.003G003600.1 No alias NLP-type transcription factor & nitrate response... 0.03 Orthogroups_2024-Update
Sobic.004G034100.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 604 652
IPR000270 PB1_dom 914 994
No external refs found!