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  5. Solyc08g008490

Solyc08g008490


Description : WD-repeat protein, putative (AHRD V3.3 *** B9RYR0_RICCO)


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g008490
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Bradi5g18647 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g26250 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc03g082870 No alias WD-repeat protein, putative (AHRD V3.3 *** B9T7W7_RICCO) 0.04 Orthogroups_2024-Update
Solyc06g052070 No alias WD-repeat protein, putative (AHRD V3.3 *** B9T7W7_RICCO) 0.05 Orthogroups_2024-Update
Sopen08g031130 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update
Sopen10g002800 No alias WD domain, G-beta repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 280
IPR001680 WD40_repeat 389 425
IPR001680 WD40_repeat 348 383
No external refs found!