1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g48270

LOC_Os05g48270


Description : auxin-responsive protein, putative, expressed


Gene families : OG_42_0000188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000188_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g48270
Cluster HCCA clusters: cluster_0025

Target Alias Description ECC score Gene Family Method Actions
65529 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
A4A49_25063 No alias cytochrome b561 and domon domain-containing protein 0.02 Orthogroups_2024-Update
A4A49_30430 No alias cytochrome b561 and domon domain-containing protein 0.03 Orthogroups_2024-Update
At2g04850 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 Orthogroups_2024-Update
At3g59070 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 Orthogroups_2024-Update
Bradi1g71540 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Bradi1g71580 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Bradi2g17067 No alias Cytochrome b561/ferric reductase transmembrane with... 0.02 Orthogroups_2024-Update
Bradi3g35060 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Bradi4g34300 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
Brara.A03602.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.A03610.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C03207.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G112530 No alias Cytochrome b561/ferric reductase transmembrane with... 0.02 Orthogroups_2024-Update
HORVU4Hr1G071360.5 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g09880 No alias AIR12, putative, expressed 0.02 Orthogroups_2024-Update
MA_19696g0010 No alias (at5g35735 : 118.0) Auxin-responsive family protein;... 0.05 Orthogroups_2024-Update
PSME_00017237-RA No alias (at3g25290 : 264.0) Auxin-responsive family protein;... 0.02 Orthogroups_2024-Update
Potri.002G222700 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Potri.002G249200 No alias auxin-responsive family protein 0.03 Orthogroups_2024-Update
Potri.002G249300 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
Potri.007G024700 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Sobic.002G254900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G255000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G198000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g063470 No alias LOW QUALITY:Auxin induced-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc07g048050 No alias Auxin-responsive family protein (AHRD V3.3 *** A0A061DLW5_THECC) 0.03 Orthogroups_2024-Update
Solyc09g097890 No alias Auxin induced-like protein (AHRD V3.3 *** E0Z5V6_PICSI) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006559 L-phenylalanine catabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006593 Cyt_b561/ferric_Rdtase_TM 204 324
No external refs found!