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  5. LOC_Os05g48840

LOC_Os05g48840


Description : expressed protein


Gene families : OG_42_0000299 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g48840
Cluster HCCA clusters: cluster_0090

Target Alias Description ECC score Gene Family Method Actions
A4A49_63453 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Glyma.18G097400 No alias Protein of unknown function (DUF679) 0.03 Orthogroups_2024-Update
Potri.008G087000 No alias Protein of unknown function (DUF679) 0.03 Orthogroups_2024-Update
Potri.011G058000 No alias Protein of unknown function (DUF679) 0.02 Orthogroups_2024-Update
Potri.017G016300 No alias Protein of unknown function (DUF679) 0.03 Orthogroups_2024-Update
Seita.4G155100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G176800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G005600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G097900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
InterPro domains Description Start Stop
IPR007770 DMP 69 233
No external refs found!