LOC_Os05g48980

Description : ras-related protein, putative, expressed

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g48980
Cluster	HCCA clusters: cluster_0111

Target	Alias	Description	ECC score	Gene Family Method
A4A49_09664	No alias	ras-related protein raba1f	0.03	Orthogroups_2024-Update
At5g65270	No alias	RABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]	0.02	Orthogroups_2024-Update
Brara.I02933.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
Brara.J00061.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
Glyma.01G080300	No alias	RAB GTPase homolog A4D	0.03	Orthogroups_2024-Update
Potri.006G057700	No alias	RAB GTPase homolog A4D	0.03	Orthogroups_2024-Update
Potri.016G050400	No alias	RAB GTPase homolog A4D	0.04	Orthogroups_2024-Update
Pp1s84_180V6	No alias	ras-related protein rab11a	0.01	Orthogroups_2024-Update
Solyc03g079900	No alias	Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT)	0.02	Orthogroups_2024-Update
Solyc05g052900	No alias	Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT)	0.03	Orthogroups_2024-Update
Solyc06g005810	No alias	Ras-related protein Rab11C (AHRD V3.3 *** RB11C_LOTJA)	0.03	Orthogroups_2024-Update
Solyc12g014080	No alias	Rab family GTPase (AHRD V3.3 *** D8RE14_SELML)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006825	copper ion transport	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0035434	copper ion transmembrane transport	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	174

External Links

No external refs found!