- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : beta-carotene isomerase D27 (AHRD V3.3 *** AT1G64680.2)
Gene families : OG_42_0001407 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001407_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc08g008630 | |
| Cluster | HCCA clusters: Cluster_201 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g03055 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.03 | Orthogroups_2024-Update | |
| Brara.I01257.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I05544.1 | No alias | carotenoid isomerase *(DWARF27) | 0.05 | Orthogroups_2024-Update | |
| Glyma.02G143300 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G076030.9 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Mp6g03970.1 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.03 | Orthogroups_2024-Update | |
| Pp1s6_190V6 | No alias | F1N19.25; expressed protein [Arabidopsis thaliana] | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
| MF | GO:0004497 | monooxygenase activity | IEP | Predicted GO |
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Predicted GO |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Predicted GO |
| BP | GO:0009725 | response to hormone | IEP | Predicted GO |
| BP | GO:0009733 | response to auxin | IEP | Predicted GO |
| BP | GO:0010033 | response to organic substance | IEP | Predicted GO |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Predicted GO |
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Predicted GO |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Predicted GO |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Predicted GO |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0042126 | nitrate metabolic process | IEP | Predicted GO |
| BP | GO:0042128 | nitrate assimilation | IEP | Predicted GO |
| BP | GO:0042221 | response to chemical | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0051213 | dioxygenase activity | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| MF | GO:0098809 | nitrite reductase activity | IEP | Predicted GO |
| BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |