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  5. Solyc08g013700

Solyc08g013700


Description : B3 domain-containing protein (AHRD V3.3 *** A0A1D1Z5C9_9ARAE)


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g013700
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Bradi5g19260 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
Pp1s135_69V6 No alias ap2 domain-containing transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 55 160
No external refs found!