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  5. LOC_Os05g50480

LOC_Os05g50480


Description : protein of unknown function DUF1296 domain containing protein, expressed


Gene families : OG_42_0001872 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g50480
Cluster HCCA clusters: cluster_0017

Target Alias Description ECC score Gene Family Method Actions
Sobic.009G234700.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0007050 cell cycle arrest IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR009719 GIP1 36 95
No external refs found!