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  5. LOC_Os06g01210

LOC_Os06g01210


Description : plastocyanin, chloroplast precursor, putative, expressed


Gene families : OG_42_0005261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g01210
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
Kfl00079_0240 kfl00079_0240_v1.1 (p18068|plas_chlre : 158.0) Plastocyanin, chloroplast... 0.02 Orthogroups_2024-Update
MA_10427889g0020 No alias (p16002|plas_pea : 186.0) Plastocyanin, chloroplast... 0.03 Orthogroups_2024-Update
Seita.4G000900.1 No alias plastocyanin electron carrier 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0009055 electron transfer activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000923 BlueCu_1 59 154
No external refs found!