LOC_Os06g01230

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os06g01230
Cluster	HCCA clusters: cluster_0119

Target	Alias	Description	ECC score	Gene Family Method
A4A49_20604	No alias	nac domain-containing protein 43	0.02	Orthogroups_2024-Update
Brara.A00235.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.A03837.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00141.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D00978.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.E01767.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F02061.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03613.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J02389.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.06G318900	No alias	NAC 007	0.02	Orthogroups_2024-Update
Glyma.09G233600	No alias	NAC domain containing protein 70	0.02	Orthogroups_2024-Update
Glyma.16G042900	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
LOC_Os10g42130	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
Sobic.010G155000.2	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sopen06g029400	No alias	No apical meristem (NAM) protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	19	147

External Links

No external refs found!

LOC_Os06g01230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation